Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015799094.1_cds_XP_016463403.1_5622
CDS Infomation

[gene=LOC107786448] [db_xref=GeneID:107786448] [protein=putative amidase C869.01] [protein_id=XP_016463403.1] [location=join(304..442,503..693,766..863,7330..7428,7923..8040,8319..8775,11170..11242,11783..11961,12043..12073,12194..12392,12632..13015)] [gbkey=CDS]
Sequence

ATGGGATCCANTCATAAGGGAGAGGACCTTTTTCGTGATCTGTTTACTGGTGTCGACGAT
GTTGACGACACTAGTGATGCAACGGATATTTTCCACGGAGTGCAACAGGCTTTGAATTGG
GTAAGATTTAACTTACTTTTCGCAACAGTTCATCGAGAAGCATGTTCTCGGTCTCGTGTC
GAGCTGCATCGATGCGAGGCCGACCTCCAACGGGTCACAGAGGAGAGGAACACCCTTAAA
CTCCTCTTAGAGCAAAGGGGAGAGGAAATTAAGGACCTCCGAGCTGAGTTGGCCAAGGCT
CACCAAGGTCAGATCGATCTGACCGAGAAGCAAAAGCTTGAGATGATCGGGAAACTCCGT
GAGGAGATCGATATGATAAAGGCGGAGTCCTTGAAATTGAAAAAAAATATGGACCTCTTT
GCTGCAGAGTACTTTGACTCGAGCTTCCACGACATCGATAAGCGGCCTTCCGGCCTTAGG
CGTCAAGTTGTTGATTTTATCTTGAAGGTCGACTTCGTTGTCAATAGGATTCTCTCCCCT
AGTGCGGTTGCAACGGCTCTTGTCTGTGAGTTCGATATTGGCGCGAGCTCGGCATTGACT
CGAGCTCTCGATCTTGACTCGAGCTCGATTCTGACTCGAAGTCCGGAGTACCATTTCAAT
ATTGAAGAAGCTACAATCAAAGACATACAATTGGCCTTTGCCCAAAACAAGCTCACATCA
AGAAAACTCGTTGACTTGTACTTGCATAAAATTGAGACCCTTAATCTTGTTCTTCGTGGA
GTTATCGAAGTGAATCCGGACGTGCGAAAACAAGCCGATGAAGCTGATAAACAAAGGGAG
ATAATTAAGAAGAAAATGAGCAGTTTACACGGTATTCCTGTTCTGGTCAAAGATAGCATA
GCAACAAAGGATAAACTTAATACTACTGCGGGGTCTTACGCGTTGCTAGGTTCAGAGGTG
CGTAGAGATGCTACAGTTGTGGAGAGGCTAAGGAATGATGGTGCTTTGATTTTGGGAAAG
GCTAGTATGAGTGAATGGTACCATTTTCGATCTTTCAGTATTCCTGATGGATGGTCTGCT
ACAGGTGGCCAAGGTGTGGTGAGCCTCAAACCCACCGTTGGACTCACTAGCCGTGTTGGT
GTCATTCCCCTCTCTCCTCGACAGGACACAATTGGGCCCATATGCAGAACGGTTTCAGAT
GCTGTATATGTTCTTGATTCCATTGTTGGCTTCGATATAAGAGACCTTGAAGCAACAAGG
GCAGCAGCAAAGTTCATTCCAGCCGGTGGTTATAAACAATTTCTCAATGAAGATGGCCTT
AAGGGAAAGAGATTGGGTGTGGTAAGACATCCTTCGATATTGACTGGTCATTTGCAGACA
CTAAGGCAAAGAGGTGCAGTTGTATTGGATAATCTTGAAATTCCAAATATTGATGTGGTT
TTAGACCCCAATCAAAGTGGTGCGGAAGTGGCATTACTAGCAGAGTTCAAGCTCTCACTC
AACAATTATCTAGCAGAGCTAGTCACACTCCCAGTTAGATCACTCGCTGAGATAATAGCC
TTCAACCAGAATAACCCAAAATTGGAAGGAAGTAAAAGCTTTGGTCAAGAAATTTTCATA
GCAGCAGAAGCAACAAAAGGGATTGGAGAGAAAGAGAGGAAGGCAATGGCGATGATGGAG
AAACTTTCAGAAGATGGATTTGAGAAACTGATGATAGAGAATGAACTGGATGCCTTAGTG
AACATAGGTTCAGGTGTTTCCACAGTTTTGGCTATTGGAGGATATCCAGCAATAATAGTT
CCTGCTGGTTATAATAGTACTAATGGTATGCCTTTTGGTATATGCTTTGGAGGGGTGAAA
GGAAGTGAACCAAAGCTGATTGAGATCGCTTATGCTTTTGAACAAGCGACCATGATCTGC
AGACCTCCTTTCTCCAAGTCAATTAATACTCTTATTCCTTCATTTTAA

Peptide Sequence

PEP ID

XP_016463403.1
PEP Infomation

PREDICTED: putative amidase C869.01 [Nicotiana tabacum]
Sequence

MGSXHKGEDLFRDLFTGVDDVDDTSDATDIFHGVQQALNWVRFNLLFATVHREACSRSRV
ELHRCEADLQRVTEERNTLKLLLEQRGEEIKDLRAELAKAHQGQIDLTEKQKLEMIGKLR
EEIDMIKAESLKLKKNMDLFAAEYFDSSFHDIDKRPSGLRRQVVDFILKVDFVVNRILSP
SAVATALVCEFDIGASSALTRALDLDSSSILTRSPEYHFNIEEATIKDIQLAFAQNKLTS
RKLVDLYLHKIETLNLVLRGVIEVNPDVRKQADEADKQREIIKKKMSSLHGIPVLVKDSI
ATKDKLNTTAGSYALLGSEVRRDATVVERLRNDGALILGKASMSEWYHFRSFSIPDGWSA
TGGQGVVSLKPTVGLTSRVGVIPLSPRQDTIGPICRTVSDAVYVLDSIVGFDIRDLEATR
AAAKFIPAGGYKQFLNEDGLKGKRLGVVRHPSILTGHLQTLRQRGAVVLDNLEIPNIDVV
LDPNQSGAEVALLAEFKLSLNNYLAELVTLPVRSLAEIIAFNQNNPKLEGSKSFGQEIFI
AAEATKGIGEKERKAMAMMEKLSEDGFEKLMIENELDALVNIGSGVSTVLAIGGYPAIIV
PAGYNSTNGMPFGICFGGVKGSEPKLIEIAYAFEQATMICRPPFSKSINTLIPSF

Transcript Sequence

Gene sequence data has not been registered.